Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944176.1_cds_XP_016487107.1_77880
CDS Infomation

[gene=LOC107807270] [db_xref=GeneID:107807270] [protein=histidinol dehydrogenase, chloroplastic-like] [protein_id=XP_016487107.1] [location=join(1498..1609,1826..1947,2059..2111,3085..3157,3341..3442,3554..3655,3759..3830,3907..3969,4098..4139,5324..5383,5525..5635,5870..6040,6229..6319,7919..8202)] [gbkey=CDS]
Sequence

ATGGACTGCAGAATTCTATCATTGAATAGGTCCTGTAGCTTGGCTAGTAATCTTCGGGCC
ATTCCTACACGCAATACTGTATTTTATCGGAAATGTTCTTATCTGCCTGCAGGGTTATTT
CGTAAGTCAATTAGGTGCTCAATGAAGTCCTATAGGTTATCAGAGCTTTCAGCTTCTGAG
GTTGACAGCCTCAAAGCTCGTCCGCGCATTGATTTCTCCTCCATTTTCAACACAGTTCAA
CCCATTGTTGATGATGTTCGTAATAGAGGTGATGCTGCAGTTAAAGATTACACATCACGG
TTCGACAAAGTTGTACTGGATAAGATAGTTGAAGATGTCAATGAGCTTCCAGATCCTGAG
CTTGATTCAGCTGTTCGAGAAGCATTTGATGTGGCATATAACAACATATATGCCTTTCAT
GCTGCTCAAAAGCCTGTTGAGAAAGTTGTGGAGAACATGCATGGTGTCAGATGTAAACGT
GTGGCTAGGAGCATCGCCTCTGTAGGGCTTTATGTTCCTGGTGGAACAGCTGTTTTACCT
TCTACAGCTCTGATGCTTTCAGTTCCAGCACAAATTGCTGGGTGTAAAACTGTTGTACTT
GCAACTCCACCTTCTCGGGATGGCAGCATTTGCAAGGAAGTGCTTTATTGTGCCAAGAAA
GCAGGTGTGACCCACATCCTTAGAGGTGGAGGTGCTCAGGCAATTTCTGCTATGGCCTGG
GGCACTGAATCCTGCCCAAAGGTTGAGAAGATATATGGGCCTGGGAACCAGTATGTTACC
GCTGCAAAAATGATTCTGCAGAACAGCGAAGCTATGGTTTCAATCGACATGCCAGCTGGG
CCTTCAGAAGTCCTTGTTATAGCTGACAAGCATTCCAGTCCTGTCCATGTGGCAGCAGAT
TTACTTTCACAGGCAGAGCATGGGCCAGATAGCCAAGTCGTACTGGTTATTGCTGGGGAT
GGTGTTGATCTAAATGCTATTCAAGAGGAAATTAGGAAGCAGTGCCAAGCCCTTCCAAGG
GGAGAATTTGCACTTCAGGCACTTAGCCACAGCTTCACTGTGTTAGCACGGGATATGCTT
GAGGCAATTTCCTTCTCAAACATGTATGCACCTGAGCATCTGATAATCAATGTGAATGAA
GCTGAGAAGTGGGAAAGTTTAATTGAGAATGCAGGTTCTGTATTTATGGGACAGTGGACA
CCTGAGAGTGTAGGAGATTATGCAAGTGGAACTAACCATGTTCTGCCAACTTACGGGTAT
GCACGGATGTATGGTGGAGTCTCTTTAGACTCTTTCTTGAAATACATTACTGTGCAGTCT
TTAACAGAAGAAGGGCTGAAGAATCTTGGCCCCTATGTGGAGAAAATGGCCGAAGTTGAG
GGTTTGGATGCCCACAAGAGGGCTGTAACCCTCAGACTGCAGGACATAGAAGCGAGGCAA
ATATCACACTCAAGATGA

Peptide Sequence

PEP ID

XP_016487107.1
PEP Infomation

PREDICTED: histidinol dehydrogenase, chloroplastic-like [Nicotiana tabacum]
Sequence

MDCRILSLNRSCSLASNLRAIPTRNTVFYRKCSYLPAGLFRKSIRCSMKSYRLSELSASE
VDSLKARPRIDFSSIFNTVQPIVDDVRNRGDAAVKDYTSRFDKVVLDKIVEDVNELPDPE
LDSAVREAFDVAYNNIYAFHAAQKPVEKVVENMHGVRCKRVARSIASVGLYVPGGTAVLP
STALMLSVPAQIAGCKTVVLATPPSRDGSICKEVLYCAKKAGVTHILRGGGAQAISAMAW
GTESCPKVEKIYGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKHSSPVHVAAD
LLSQAEHGPDSQVVLVIAGDGVDLNAIQEEIRKQCQALPRGEFALQALSHSFTVLARDML
EAISFSNMYAPEHLIINVNEAEKWESLIENAGSVFMGQWTPESVGDYASGTNHVLPTYGY
ARMYGGVSLDSFLKYITVQSLTEEGLKNLGPYVEKMAEVEGLDAHKRAVTLRLQDIEARQ
ISHSR

Transcript Sequence

Gene sequence data has not been registered.